Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC026471.1-201ENST00000564629 3026 ntBASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC52A3Q9NQ40 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 AC090164.3-201ENST00000610780 2143 ntBASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 IRX1P1-201ENST00000438849 1838 ntBASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 LSM12P1-201ENST00000411836 588 ntBASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 AC005829.2-201ENST00000571422 1056 ntBASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 AC005181.1-201ENST00000604782 1256 ntBASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC52A3Q9NQ40 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC52A3Q9NQ40 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 AL390961.4-201ENST00000623958 2535 ntBASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 AC004911.1-201ENST00000416316 871 ntBASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 BICD1-207ENST00000551848 1962 ntBASIC18.39■□□□□ 0.53
SLC52A3Q9NQ40 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 AC079598.2-202ENST00000546624 1451 ntBASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC52A3Q9NQ40 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 AC124283.5-201ENST00000624661 1809 ntBASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms