Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.13■□□□□ 0.49
VCX3AQ9NNX9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 AC084018.2-201ENST00000613093 2607 ntBASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 AC009237.3-201ENST00000393279 1427 ntBASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VCX3AQ9NNX9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 WIZP1-201ENST00000531444 2299 ntBASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 KRT125P-201ENST00000546827 989 ntBASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
VCX3AQ9NNX9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 PKD1P5-201ENST00000532415 10291 ntBASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
VCX3AQ9NNX9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms