Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 AL135905.2-201ENST00000584934 1404 ntBASIC20.36■□□□□ 0.85
CD248Q9HCU0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.36■□□□□ 0.85
CD248Q9HCU0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.36■□□□□ 0.85
CD248Q9HCU0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD248Q9HCU0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 AL121829.2-201ENST00000620908 328 ntBASIC20.35■□□□□ 0.85
CD248Q9HCU0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.35■□□□□ 0.85
CD248Q9HCU0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD248Q9HCU0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.34■□□□□ 0.85
CD248Q9HCU0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD248Q9HCU0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CD248Q9HCU0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.33■□□□□ 0.85
CD248Q9HCU0 KRT17P2-201ENST00000300992 1314 ntBASIC20.33■□□□□ 0.85
CD248Q9HCU0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD248Q9HCU0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD248Q9HCU0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD248Q9HCU0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CD248Q9HCU0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD248Q9HCU0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.33■□□□□ 0.85
CD248Q9HCU0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD248Q9HCU0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD248Q9HCU0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.33■□□□□ 0.85
CD248Q9HCU0 AP001412.1-201ENST00000608405 714 ntBASIC20.33■□□□□ 0.85
CD248Q9HCU0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD248Q9HCU0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.33■□□□□ 0.84
CD248Q9HCU0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CD248Q9HCU0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD248Q9HCU0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD248Q9HCU0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD248Q9HCU0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD248Q9HCU0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CD248Q9HCU0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CD248Q9HCU0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.33■□□□□ 0.84
CD248Q9HCU0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms