Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP13A3Q9H7F0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATP13A3Q9H7F0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 AL445675.2-201ENST00000620291 557 ntBASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 KRT16P1-201ENST00000399124 1418 ntBASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A3Q9H7F0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 FAM197Y1-201ENST00000421178 764 ntBASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 SNORA78-201ENST00000459373 127 ntBASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 MIR4497-201ENST00000583208 89 ntBASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 CR392000.1-201ENST00000624770 1228 ntBASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A3Q9H7F0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 HLA-A-209ENST00000638375 975 ntBASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A3Q9H7F0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 AL596275.1-201ENST00000423464 877 ntBASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 MIR4785-201ENST00000585005 73 ntBASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A3Q9H7F0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms