Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 PVRIG2P-201ENST00000435460 978 ntBASIC16.48■□□□□ 0.23
GSX1Q9H4S2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.48■□□□□ 0.23
GSX1Q9H4S2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 AP005242.2-201ENST00000580065 1175 ntBASIC16.47■□□□□ 0.23
GSX1Q9H4S2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 AL031985.4-201ENST00000642138 673 ntBASIC16.47■□□□□ 0.23
GSX1Q9H4S2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 FSCN1P1-201ENST00000568912 1481 ntBASIC16.47■□□□□ 0.23
GSX1Q9H4S2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
GSX1Q9H4S2 AC073130.3-201ENST00000624389 2278 ntBASIC16.47■□□□□ 0.23
GSX1Q9H4S2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 AC097488.1-201ENST00000507834 756 ntBASIC16.46■□□□□ 0.23
GSX1Q9H4S2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 AL138966.2-201ENST00000621997 464 ntBASIC16.46■□□□□ 0.23
GSX1Q9H4S2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GSX1Q9H4S2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GSX1Q9H4S2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
GSX1Q9H4S2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
GSX1Q9H4S2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GSX1Q9H4S2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 AC006538.3-201ENST00000612495 578 ntBASIC16.45■□□□□ 0.22
GSX1Q9H4S2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 AL049796.1-201ENST00000565336 1766 ntBASIC16.45■□□□□ 0.22
GSX1Q9H4S2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.45■□□□□ 0.22
GSX1Q9H4S2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GSX1Q9H4S2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GSX1Q9H4S2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.44■□□□□ 0.22
GSX1Q9H4S2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GSX1Q9H4S2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GSX1Q9H4S2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms