Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 AL158047.1-201ENST00000445918 881 ntBASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 GCSHP5-201ENST00000443090 522 ntBASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 AC128676.1-201ENST00000454392 318 ntBASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
FOXP3Q9BZS1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.02■□□□□ 0.79
FOXP3Q9BZS1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
FOXP3Q9BZS1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
FOXP3Q9BZS1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 CYP2T3P-201ENST00000601990 817 ntBASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FOXP3Q9BZS1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 UNC93B5-201ENST00000530315 699 ntBASIC20■□□□□ 0.79
FOXP3Q9BZS1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 CROCCP3-202ENST00000420820 1947 ntBASIC20■□□□□ 0.79
FOXP3Q9BZS1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXP3Q9BZS1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FOXP3Q9BZS1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXP3Q9BZS1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms