Protein–RNA interactions for Protein: Q9BX40

LSM14B, Protein LSM14 homolog B, humanhuman

Known RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14BQ9BX40 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
LSM14BQ9BX40 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.15■□□□□ 0.98
LSM14BQ9BX40 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LSM14BQ9BX40 RNF165-205ENST00000588679 2904 ntBASIC21.15■□□□□ 0.98
LSM14BQ9BX40 AC120498.9-201ENST00000339021 3867 ntBASIC21.15■□□□□ 0.98
LSM14BQ9BX40 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM14BQ9BX40 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM14BQ9BX40 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
LSM14BQ9BX40 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.14■□□□□ 0.97
LSM14BQ9BX40 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM14BQ9BX40 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 AC083880.1-201ENST00000608266 535 ntBASIC21.13■□□□□ 0.97
LSM14BQ9BX40 HLA-B-256ENST00000639848 1089 ntBASIC21.13■□□□□ 0.97
LSM14BQ9BX40 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LSM14BQ9BX40 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 AC004408.2-201ENST00000623613 2777 ntBASIC21.12■□□□□ 0.97
LSM14BQ9BX40 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 AL158047.1-201ENST00000445918 881 ntBASIC21.12■□□□□ 0.97
LSM14BQ9BX40 PNMA6B-201ENST00000538162 1200 ntBASIC21.12■□□□□ 0.97
LSM14BQ9BX40 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM14BQ9BX40 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 ESRRAP1-201ENST00000400596 1257 ntBASIC21.11■□□□□ 0.97
LSM14BQ9BX40 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 AC142381.4-202ENST00000563973 229 ntBASIC21.11■□□□□ 0.97
LSM14BQ9BX40 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
LSM14BQ9BX40 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms