Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 PGM5P4-201ENST00000421970 445 ntBASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBA1CQ9BQE3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBA1CQ9BQE3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 AL691432.2-201ENST00000607222 2038 ntBASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 AC060766.5-201ENST00000590539 871 ntBASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 AL356652.1-201ENST00000615962 565 ntBASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 HLA-B-256ENST00000639848 1089 ntBASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 LTB4R2-202ENST00000528054 3092 ntBASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1CQ9BQE3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms