Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VGLL1Q99990 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VGLL1Q99990 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VGLL1Q99990 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VGLL1Q99990 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.7□□□□□ -0.06
VGLL1Q99990 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
VGLL1Q99990 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.7□□□□□ -0.06
VGLL1Q99990 KRT17P1-201ENST00000399211 1546 ntBASIC14.7□□□□□ -0.06
VGLL1Q99990 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.7□□□□□ -0.06
VGLL1Q99990 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VGLL1Q99990 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VGLL1Q99990 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
VGLL1Q99990 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.69□□□□□ -0.06
VGLL1Q99990 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.69□□□□□ -0.06
VGLL1Q99990 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
VGLL1Q99990 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.69□□□□□ -0.06
VGLL1Q99990 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.69□□□□□ -0.06
VGLL1Q99990 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.69□□□□□ -0.06
VGLL1Q99990 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 AC007322.1-201ENST00000426983 750 ntBASIC14.69□□□□□ -0.06
VGLL1Q99990 AC006015.1-201ENST00000429970 570 ntBASIC14.69□□□□□ -0.06
VGLL1Q99990 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.69□□□□□ -0.06
VGLL1Q99990 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.69□□□□□ -0.06
VGLL1Q99990 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.69□□□□□ -0.06
VGLL1Q99990 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.69□□□□□ -0.06
VGLL1Q99990 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.69□□□□□ -0.06
VGLL1Q99990 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VGLL1Q99990 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
VGLL1Q99990 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.69□□□□□ -0.06
VGLL1Q99990 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 AC018553.1-201ENST00000616682 1458 ntBASIC14.69□□□□□ -0.06
VGLL1Q99990 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VGLL1Q99990 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.68□□□□□ -0.06
VGLL1Q99990 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VGLL1Q99990 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
VGLL1Q99990 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VGLL1Q99990 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.68□□□□□ -0.06
VGLL1Q99990 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.68□□□□□ -0.06
VGLL1Q99990 AC026271.2-201ENST00000428091 497 ntBASIC14.68□□□□□ -0.06
VGLL1Q99990 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.68□□□□□ -0.06
VGLL1Q99990 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.68□□□□□ -0.06
VGLL1Q99990 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.68□□□□□ -0.06
VGLL1Q99990 BID-214ENST00000617586 542 ntTSL 5 BASIC14.68□□□□□ -0.06
VGLL1Q99990 OR10C1-204ENST00000622521 1039 ntBASIC14.68□□□□□ -0.06
VGLL1Q99990 AC231657.2-201ENST00000624556 255 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms