Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NDNQ99608 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.44■□□□□ 0.7
NDNQ99608 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.44■□□□□ 0.7
NDNQ99608 PNMA6B-201ENST00000538162 1200 ntBASIC19.44■□□□□ 0.7
NDNQ99608 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.44■□□□□ 0.7
NDNQ99608 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.44■□□□□ 0.7
NDNQ99608 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
NDNQ99608 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDNQ99608 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.43■□□□□ 0.7
NDNQ99608 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 AC069152.1-201ENST00000438030 544 ntBASIC19.43■□□□□ 0.7
NDNQ99608 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.43■□□□□ 0.7
NDNQ99608 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.43■□□□□ 0.7
NDNQ99608 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.43■□□□□ 0.7
NDNQ99608 AC060766.5-201ENST00000590539 871 ntBASIC19.43■□□□□ 0.7
NDNQ99608 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.43■□□□□ 0.7
NDNQ99608 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDNQ99608 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 NEFHP1-201ENST00000412845 2629 ntBASIC19.42■□□□□ 0.7
NDNQ99608 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
NDNQ99608 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 LTB4R2-202ENST00000528054 3092 ntBASIC19.42■□□□□ 0.7
NDNQ99608 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDNQ99608 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.42■□□□□ 0.7
NDNQ99608 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDNQ99608 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.42■□□□□ 0.7
NDNQ99608 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.42■□□□□ 0.7
NDNQ99608 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NDNQ99608 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.42■□□□□ 0.7
NDNQ99608 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDNQ99608 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NDNQ99608 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.41■□□□□ 0.7
NDNQ99608 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NDNQ99608 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.41■□□□□ 0.7
NDNQ99608 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NDNQ99608 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NDNQ99608 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.41■□□□□ 0.7
NDNQ99608 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.41■□□□□ 0.7
NDNQ99608 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.41■□□□□ 0.7
NDNQ99608 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.41■□□□□ 0.7
NDNQ99608 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.41■□□□□ 0.7
NDNQ99608 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDNQ99608 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.41■□□□□ 0.7
NDNQ99608 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms