Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LRRC46Q96FV0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 AC124283.5-201ENST00000624661 1809 ntBASIC17.47■□□□□ 0.39
LRRC46Q96FV0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC46Q96FV0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 AFG3L1P-217ENST00000557444 2447 ntBASIC17.46■□□□□ 0.39
LRRC46Q96FV0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 KRT8P17-201ENST00000453110 1448 ntBASIC17.46■□□□□ 0.39
LRRC46Q96FV0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC46Q96FV0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LRRC46Q96FV0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 KRT16P1-201ENST00000399124 1418 ntBASIC17.45■□□□□ 0.38
LRRC46Q96FV0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LRRC46Q96FV0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 KRT16P6-202ENST00000425692 1426 ntBASIC17.44■□□□□ 0.38
LRRC46Q96FV0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRC46Q96FV0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC46Q96FV0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms