Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 AL390719.1-204ENST00000412397 1219 ntBASIC16.85■□□□□ 0.29
CPNE2Q96FN4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE2Q96FN4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 RARRES2P6-201ENST00000567333 442 ntBASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE2Q96FN4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE2Q96FN4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 AC133552.2-202ENST00000575694 574 ntBASIC16.83■□□□□ 0.28
CPNE2Q96FN4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 AP000974.1-201ENST00000623909 2387 ntBASIC16.83■□□□□ 0.28
CPNE2Q96FN4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE2Q96FN4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 AC116351.2-201ENST00000606540 1585 ntBASIC16.82■□□□□ 0.28
CPNE2Q96FN4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.82■□□□□ 0.28
CPNE2Q96FN4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.82■□□□□ 0.28
CPNE2Q96FN4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms