Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 TFP1-202ENST00000475455 1573 ntBASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTI1AQ96AJ9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 AC018553.1-201ENST00000616682 1458 ntBASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTI1AQ96AJ9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 UPK3BP1-201ENST00000428678 509 ntBASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 AC130371.2-201ENST00000619443 611 ntBASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VTI1AQ96AJ9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 KRT18P16-201ENST00000510337 1294 ntBASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 AC011298.2-201ENST00000617989 482 ntBASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VTI1AQ96AJ9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
VTI1AQ96AJ9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
VTI1AQ96AJ9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VTI1AQ96AJ9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.89■■□□□ 1.1
VTI1AQ96AJ9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 AC022616.7-201ENST00000525383 220 ntBASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 AC091076.1-201ENST00000610741 619 ntBASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 FAM87A-204ENST00000613235 858 ntBASIC21.89■■□□□ 1.09
VTI1AQ96AJ9 AL358472.4-201ENST00000633140 710 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms