Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ZNF815P-204ENST00000434898 1737 ntBASIC18.69■□□□□ 0.58
UBE2E3Q969T4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.68■□□□□ 0.58
UBE2E3Q969T4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 CD99P1-205ENST00000527459 561 ntBASIC18.68■□□□□ 0.58
UBE2E3Q969T4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2E3Q969T4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 Z82202.1-201ENST00000623446 1880 ntBASIC18.67■□□□□ 0.58
UBE2E3Q969T4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2E3Q969T4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.66■□□□□ 0.58
UBE2E3Q969T4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2E3Q969T4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2E3Q969T4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.64■□□□□ 0.58
UBE2E3Q969T4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBE2E3Q969T4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.64■□□□□ 0.57
UBE2E3Q969T4 AC239809.2-201ENST00000415381 517 ntBASIC18.64■□□□□ 0.57
UBE2E3Q969T4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms