Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
RPGRQ92834 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 KRT18P48-201ENST00000434763 852 ntBASIC23.98■■□□□ 1.43
RPGRQ92834 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.98■■□□□ 1.43
RPGRQ92834 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.98■■□□□ 1.43
RPGRQ92834 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.98■■□□□ 1.43
RPGRQ92834 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.98■■□□□ 1.43
RPGRQ92834 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.98■■□□□ 1.43
RPGRQ92834 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.98■■□□□ 1.43
RPGRQ92834 AC008622.2-201ENST00000617006 1229 ntBASIC23.98■■□□□ 1.43
RPGRQ92834 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
RPGRQ92834 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.98■■□□□ 1.43
RPGRQ92834 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.98■■□□□ 1.43
RPGRQ92834 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RPGRQ92834 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPGRQ92834 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPGRQ92834 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RPGRQ92834 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RPGRQ92834 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.97■■□□□ 1.43
RPGRQ92834 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RPGRQ92834 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.97■■□□□ 1.43
RPGRQ92834 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPGRQ92834 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.97■■□□□ 1.43
RPGRQ92834 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.97■■□□□ 1.43
RPGRQ92834 AL121894.2-201ENST00000602977 491 ntBASIC23.97■■□□□ 1.43
RPGRQ92834 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPGRQ92834 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.97■■□□□ 1.43
RPGRQ92834 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
RPGRQ92834 PKD1P6-201ENST00000343738 4769 ntBASIC23.96■■□□□ 1.43
RPGRQ92834 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
RPGRQ92834 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RPGRQ92834 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 AC005332.1-201ENST00000577698 1310 ntBASIC23.96■■□□□ 1.43
RPGRQ92834 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.96■■□□□ 1.43
RPGRQ92834 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.96■■□□□ 1.43
RPGRQ92834 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.96■■□□□ 1.43
RPGRQ92834 PRSS44-201ENST00000515154 1146 ntBASIC23.96■■□□□ 1.43
RPGRQ92834 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.96■■□□□ 1.43
RPGRQ92834 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RPGRQ92834 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
RPGRQ92834 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPGRQ92834 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.96■■□□□ 1.43
RPGRQ92834 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.96■■□□□ 1.43
RPGRQ92834 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.95■■□□□ 1.43
RPGRQ92834 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
RPGRQ92834 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.95■■□□□ 1.42
RPGRQ92834 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.95■■□□□ 1.42
RPGRQ92834 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.95■■□□□ 1.42
RPGRQ92834 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.95■■□□□ 1.42
RPGRQ92834 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.95■■□□□ 1.42
RPGRQ92834 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPGRQ92834 KRT18P38-201ENST00000449496 1282 ntBASIC23.95■■□□□ 1.42
RPGRQ92834 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.95■■□□□ 1.42
RPGRQ92834 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
RPGRQ92834 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.95■■□□□ 1.42
RPGRQ92834 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RPGRQ92834 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RPGRQ92834 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPGRQ92834 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.95■■□□□ 1.42
RPGRQ92834 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPGRQ92834 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
RPGRQ92834 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPGRQ92834 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPGRQ92834 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RPGRQ92834 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.94■■□□□ 1.42
RPGRQ92834 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
RPGRQ92834 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.94■■□□□ 1.42
RPGRQ92834 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RPGRQ92834 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
RPGRQ92834 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.94■■□□□ 1.42
RPGRQ92834 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.94■■□□□ 1.42
RPGRQ92834 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.94■■□□□ 1.42
RPGRQ92834 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPGRQ92834 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPGRQ92834 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPGRQ92834 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RPGRQ92834 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.93■■□□□ 1.42
RPGRQ92834 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 AP000523.1-201ENST00000398242 1049 ntBASIC23.93■■□□□ 1.42
RPGRQ92834 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.93■■□□□ 1.42
RPGRQ92834 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RPGRQ92834 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms