Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLL1Q8TB92 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCLL1Q8TB92 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLL1Q8TB92 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLL1Q8TB92 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCLL1Q8TB92 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCLL1Q8TB92 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCLL1Q8TB92 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 NEFHP1-201ENST00000412845 2629 ntBASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 TMEM191A-211ENST00000637163 1067 ntBASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCLL1Q8TB92 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 AC124016.1-201ENST00000609552 612 ntBASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 AP006587.1-201ENST00000534129 1502 ntBASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCLL1Q8TB92 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 AC239809.2-201ENST00000415381 517 ntBASIC19.04■□□□□ 0.64
HMGCLL1Q8TB92 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms