Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PNMA1Q8ND90 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.64■■□□□ 1.22
PNMA1Q8ND90 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 AL160286.2-201ENST00000567150 934 ntBASIC22.64■■□□□ 1.21
PNMA1Q8ND90 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.64■■□□□ 1.21
PNMA1Q8ND90 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 Z85996.1-201ENST00000494644 937 ntBASIC22.63■■□□□ 1.21
PNMA1Q8ND90 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 MIR6786-201ENST00000616843 113 ntBASIC22.63■■□□□ 1.21
PNMA1Q8ND90 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.63■■□□□ 1.21
PNMA1Q8ND90 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 B3GAT3P1-201ENST00000471720 806 ntBASIC22.62■■□□□ 1.21
PNMA1Q8ND90 AC011506.1-201ENST00000474329 610 ntBASIC22.62■■□□□ 1.21
PNMA1Q8ND90 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.62■■□□□ 1.21
PNMA1Q8ND90 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 FSCN1P1-201ENST00000568912 1481 ntBASIC22.61■■□□□ 1.21
PNMA1Q8ND90 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 RBM17P1-201ENST00000453646 1190 ntBASIC22.61■■□□□ 1.21
PNMA1Q8ND90 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 RCC2P6-201ENST00000526625 1557 ntBASIC22.61■■□□□ 1.21
PNMA1Q8ND90 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PNMA1Q8ND90 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.6■■□□□ 1.21
PNMA1Q8ND90 BX088651.1-201ENST00000540551 451 ntBASIC22.6■■□□□ 1.21
PNMA1Q8ND90 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PNMA1Q8ND90 ZNF815P-204ENST00000434898 1737 ntBASIC22.6■■□□□ 1.21
PNMA1Q8ND90 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 AC104417.2-201ENST00000562989 1793 ntBASIC22.59■■□□□ 1.21
PNMA1Q8ND90 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.59■■□□□ 1.21
PNMA1Q8ND90 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms