Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP11CQ8NB49 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 AC009237.14-201ENST00000609975 1594 ntBASIC20.23■□□□□ 0.83
ATP11CQ8NB49 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP11CQ8NB49 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP11CQ8NB49 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 TNXA-203ENST00000507684 2038 ntBASIC20.21■□□□□ 0.83
ATP11CQ8NB49 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 AC133681.1-201ENST00000465482 601 ntBASIC20.21■□□□□ 0.83
ATP11CQ8NB49 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 AC110285.5-201ENST00000611501 352 ntBASIC20.21■□□□□ 0.83
ATP11CQ8NB49 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP11CQ8NB49 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP11CQ8NB49 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP11CQ8NB49 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP11CQ8NB49 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP11CQ8NB49 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms