Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN19Q8N6F1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN19Q8N6F1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 LINC01465-201ENST00000408887 1940 ntBASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 C1QL1P1-201ENST00000568105 661 ntBASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLDN19Q8N6F1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN19Q8N6F1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms