Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 MIR1238-201ENST00000408483 83 ntBASIC18.02■□□□□ 0.48
BEST3Q8N1M1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BEST3Q8N1M1 AC097493.4-201ENST00000641197 219 ntBASIC18.02■□□□□ 0.48
BEST3Q8N1M1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST3Q8N1M1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.01■□□□□ 0.47
BEST3Q8N1M1 FAM210CP-201ENST00000445714 574 ntBASIC18.01■□□□□ 0.47
BEST3Q8N1M1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 KRT18P21-201ENST00000515767 1272 ntBASIC18.01■□□□□ 0.47
BEST3Q8N1M1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 AC012306.2-201ENST00000609350 630 ntBASIC18.01■□□□□ 0.47
BEST3Q8N1M1 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.01■□□□□ 0.47
BEST3Q8N1M1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 TMEM179-206ENST00000616017 1645 ntBASIC18.01■□□□□ 0.47
BEST3Q8N1M1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST3Q8N1M1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18■□□□□ 0.47
BEST3Q8N1M1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18■□□□□ 0.47
BEST3Q8N1M1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18■□□□□ 0.47
BEST3Q8N1M1 KRT8P9-201ENST00000558927 1449 ntBASIC18■□□□□ 0.47
BEST3Q8N1M1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 AL390955.1-201ENST00000428694 934 ntBASIC18■□□□□ 0.47
BEST3Q8N1M1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18■□□□□ 0.47
BEST3Q8N1M1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18■□□□□ 0.47
BEST3Q8N1M1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 AC026271.3-201ENST00000571884 352 ntBASIC18■□□□□ 0.47
BEST3Q8N1M1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18■□□□□ 0.47
BEST3Q8N1M1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18■□□□□ 0.47
BEST3Q8N1M1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BEST3Q8N1M1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18■□□□□ 0.47
BEST3Q8N1M1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18■□□□□ 0.47
BEST3Q8N1M1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BEST3Q8N1M1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18■□□□□ 0.47
BEST3Q8N1M1 AP001271.2-201ENST00000624018 1556 ntBASIC18■□□□□ 0.47
BEST3Q8N1M1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST3Q8N1M1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST3Q8N1M1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST3Q8N1M1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
BEST3Q8N1M1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.98■□□□□ 0.47
BEST3Q8N1M1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms