Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 BX323043.1-201ENST00000641006 1765 ntBASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 AC133041.1-202ENST00000642053 222 ntBASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 AL355802.2-201ENST00000402069 882 ntBASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 AL121906.2-201ENST00000621597 723 ntBASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC00346Q8IVM7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 AP006587.1-201ENST00000534129 1502 ntBASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00346Q8IVM7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 AL020996.1-203ENST00000536896 2307 ntBASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 AC142086.2-201ENST00000569753 217 ntBASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 AC120498.8-201ENST00000614275 531 ntBASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 AC004408.2-201ENST00000623613 2777 ntBASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms