Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.54■□□□□ 0.4
SHFQ7M4L6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.54■□□□□ 0.4
SHFQ7M4L6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.54■□□□□ 0.4
SHFQ7M4L6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.54■□□□□ 0.4
SHFQ7M4L6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHFQ7M4L6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHFQ7M4L6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHFQ7M4L6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHFQ7M4L6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.53■□□□□ 0.4
SHFQ7M4L6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHFQ7M4L6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 AC026271.2-201ENST00000428091 497 ntBASIC17.52■□□□□ 0.4
SHFQ7M4L6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 AC023632.3-201ENST00000521633 145 ntBASIC17.52■□□□□ 0.4
SHFQ7M4L6 RARRES2P6-201ENST00000567333 442 ntBASIC17.52■□□□□ 0.4
SHFQ7M4L6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.52■□□□□ 0.4
SHFQ7M4L6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHFQ7M4L6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHFQ7M4L6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHFQ7M4L6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHFQ7M4L6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
SHFQ7M4L6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHFQ7M4L6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 AL512625.2-201ENST00000417533 625 ntBASIC17.51■□□□□ 0.39
SHFQ7M4L6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 C2orf69P4-201ENST00000565394 541 ntBASIC17.51■□□□□ 0.39
SHFQ7M4L6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 AC010980.2-201ENST00000587099 1412 ntBASIC17.51■□□□□ 0.39
SHFQ7M4L6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms