Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00575Q6W349 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00575Q6W349 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 AC105265.2-201ENST00000467189 838 ntBASIC12.31□□□□□ -0.44
LINC00575Q6W349 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 AL356652.1-201ENST00000615962 565 ntBASIC12.31□□□□□ -0.44
LINC00575Q6W349 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00575Q6W349 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC00575Q6W349 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AC010141.2-201ENST00000452426 721 ntBASIC12.3□□□□□ -0.44
LINC00575Q6W349 AC079140.4-201ENST00000507448 529 ntBASIC12.3□□□□□ -0.44
LINC00575Q6W349 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AC243732.1-201ENST00000612648 864 ntBASIC12.3□□□□□ -0.44
LINC00575Q6W349 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00575Q6W349 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00575Q6W349 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 PTBP1P-201ENST00000554374 1601 ntBASIC12.29□□□□□ -0.44
LINC00575Q6W349 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms