Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 UNC93B4-201ENST00000505679 747 ntBASIC19.61■□□□□ 0.73
PACS1Q6VY07 RNA5SP413-201ENST00000516373 109 ntBASIC19.61■□□□□ 0.73
PACS1Q6VY07 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS1Q6VY07 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.61■□□□□ 0.73
PACS1Q6VY07 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 AC008687.6-201ENST00000596318 630 ntBASIC19.6■□□□□ 0.73
PACS1Q6VY07 AC120498.8-201ENST00000614275 531 ntBASIC19.6■□□□□ 0.73
PACS1Q6VY07 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS1Q6VY07 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS1Q6VY07 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 RPS2P52-201ENST00000469610 820 ntBASIC19.59■□□□□ 0.73
PACS1Q6VY07 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PACS1Q6VY07 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PACS1Q6VY07 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PACS1Q6VY07 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PACS1Q6VY07 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.58■□□□□ 0.73
PACS1Q6VY07 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PACS1Q6VY07 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.58■□□□□ 0.73
PACS1Q6VY07 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.58■□□□□ 0.73
PACS1Q6VY07 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PACS1Q6VY07 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PACS1Q6VY07 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PACS1Q6VY07 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PACS1Q6VY07 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.58■□□□□ 0.72
PACS1Q6VY07 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PACS1Q6VY07 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms