Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEM88Q6PEY1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 AL391005.1-201ENST00000623953 2435 ntBASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 SUDS3P1-201ENST00000505831 966 ntBASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 AP001330.3-201ENST00000520123 633 ntBASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM88Q6PEY1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 AL691432.2-201ENST00000607222 2038 ntBASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 MKRN4P-201ENST00000444706 1521 ntBASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 AC008764.7-201ENST00000593779 1081 ntBASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM88Q6PEY1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
TMEM88Q6PEY1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
TMEM88Q6PEY1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 MIR939-201ENST00000401314 82 ntBASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM88Q6PEY1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms