Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA1Q5Y7H0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 AP006294.2-201ENST00000641667 209 ntBASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA1Q5Y7H0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA1Q5Y7H0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 KRT8P8-201ENST00000434750 1448 ntBASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQA1Q5Y7H0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 AL135905.2-201ENST00000584934 1404 ntBASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQA1Q5Y7H0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms