Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 AC116562.2-201ENST00000507042 360 ntBASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 AC026271.3-201ENST00000571884 352 ntBASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A13Q5J8X5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A13Q5J8X5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MS4A13Q5J8X5 AL158211.5-201ENST00000623583 2518 ntBASIC20.02■□□□□ 0.79
MS4A13Q5J8X5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.02■□□□□ 0.79
MS4A13Q5J8X5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.02■□□□□ 0.79
MS4A13Q5J8X5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A13Q5J8X5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 AL160286.2-201ENST00000567150 934 ntBASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A13Q5J8X5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 MESTP1-201ENST00000404287 994 ntBASIC20■□□□□ 0.79
MS4A13Q5J8X5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20■□□□□ 0.79
MS4A13Q5J8X5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 BX088651.1-201ENST00000540551 451 ntBASIC20■□□□□ 0.79
MS4A13Q5J8X5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MS4A13Q5J8X5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A13Q5J8X5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 ZNF815P-204ENST00000434898 1737 ntBASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 RBM17P1-201ENST00000453646 1190 ntBASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 MIR6786-201ENST00000616843 113 ntBASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.99■□□□□ 0.79
MS4A13Q5J8X5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms