Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TMEM191A-211ENST00000637163 1067 ntBASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.64■□□□□ 0.73
KHDC1Q4VXA5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 AC007613.1-201ENST00000572811 2597 ntBASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KHDC1Q4VXA5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KHDC1Q4VXA5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 RN7SL471P-201ENST00000580476 299 ntBASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 AC093484.2-201ENST00000580996 2166 ntBASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KHDC1Q4VXA5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms