Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX7Q2KHR2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 UNC93B2-201ENST00000285383 730 ntBASIC23.54■■□□□ 1.36
RFX7Q2KHR2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 AL390955.1-201ENST00000428694 934 ntBASIC23.54■■□□□ 1.36
RFX7Q2KHR2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFX7Q2KHR2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 FITM1-202ENST00000559294 800 ntBASIC23.53■■□□□ 1.36
RFX7Q2KHR2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 RN7SL850P-201ENST00000579959 291 ntBASIC23.53■■□□□ 1.36
RFX7Q2KHR2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 CR392000.1-201ENST00000624770 1228 ntBASIC23.53■■□□□ 1.36
RFX7Q2KHR2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFX7Q2KHR2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.52■■□□□ 1.36
RFX7Q2KHR2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RFX7Q2KHR2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 Z82202.1-201ENST00000623446 1880 ntBASIC23.51■■□□□ 1.35
RFX7Q2KHR2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 ZNF815P-204ENST00000434898 1737 ntBASIC23.51■■□□□ 1.35
RFX7Q2KHR2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RFX7Q2KHR2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 CYP2D8P-201ENST00000433633 1490 ntBASIC23.5■■□□□ 1.35
RFX7Q2KHR2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 MIR1238-201ENST00000408483 83 ntBASIC23.5■■□□□ 1.35
RFX7Q2KHR2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 AC010947.1-201ENST00000623454 693 ntBASIC23.5■■□□□ 1.35
RFX7Q2KHR2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RFX7Q2KHR2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms