Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
RASGEF1BQ0VAM2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 AC239809.2-201ENST00000415381 517 ntBASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 FAM197Y4-202ENST00000622692 608 ntBASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RASGEF1BQ0VAM2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 AC098590.1-201ENST00000468126 897 ntBASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 RPPH1-201ENST00000516869 333 ntBASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 AP001271.2-201ENST00000624018 1556 ntBASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 AC087289.5-201ENST00000586076 3175 ntBASIC17.61■□□□□ 0.41
RASGEF1BQ0VAM2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 KRASP1-201ENST00000407852 552 ntBASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 AL158047.1-201ENST00000445918 881 ntBASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RASGEF1BQ0VAM2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms