Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 AC142086.2-201ENST00000569753 217 ntBASIC18.7■□□□□ 0.58
HMGCS1Q01581 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 LINC01465-201ENST00000408887 1940 ntBASIC18.7■□□□□ 0.58
HMGCS1Q01581 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS1Q01581 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGCS1Q01581 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 AL355802.2-201ENST00000402069 882 ntBASIC18.69■□□□□ 0.58
HMGCS1Q01581 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS1Q01581 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.69■□□□□ 0.58
HMGCS1Q01581 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS1Q01581 ZNF815P-204ENST00000434898 1737 ntBASIC18.69■□□□□ 0.58
HMGCS1Q01581 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS1Q01581 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS1Q01581 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS1Q01581 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 AC093503.3-201ENST00000624917 2352 ntBASIC18.68■□□□□ 0.58
HMGCS1Q01581 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS1Q01581 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.68■□□□□ 0.58
HMGCS1Q01581 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 AL121906.2-201ENST00000621597 723 ntBASIC18.68■□□□□ 0.58
HMGCS1Q01581 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 TEX21P-204ENST00000641479 1693 ntBASIC18.68■□□□□ 0.58
HMGCS1Q01581 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS1Q01581 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS1Q01581 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HMGCS1Q01581 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.67■□□□□ 0.58
HMGCS1Q01581 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 SOX15-203ENST00000570788 1093 ntBASIC18.67■□□□□ 0.58
HMGCS1Q01581 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS1Q01581 AP006587.1-201ENST00000534129 1502 ntBASIC18.67■□□□□ 0.58
HMGCS1Q01581 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS1Q01581 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms