Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3AP84243 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.38■□□□□ 0.37
H3F3AP84243 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3AP84243 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3AP84243 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.38■□□□□ 0.37
H3F3AP84243 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3AP84243 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3AP84243 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.38■□□□□ 0.37
H3F3AP84243 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H3F3AP84243 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H3F3AP84243 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H3F3AP84243 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3AP84243 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.37■□□□□ 0.37
H3F3AP84243 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.37■□□□□ 0.37
H3F3AP84243 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.37■□□□□ 0.37
H3F3AP84243 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
H3F3AP84243 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
H3F3AP84243 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.37■□□□□ 0.37
H3F3AP84243 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.37■□□□□ 0.37
H3F3AP84243 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.37■□□□□ 0.37
H3F3AP84243 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.37■□□□□ 0.37
H3F3AP84243 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.37■□□□□ 0.37
H3F3AP84243 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.37■□□□□ 0.37
H3F3AP84243 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
H3F3AP84243 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3AP84243 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.37■□□□□ 0.37
H3F3AP84243 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.37■□□□□ 0.37
H3F3AP84243 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
H3F3AP84243 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3AP84243 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3AP84243 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3AP84243 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 ZNF815P-204ENST00000434898 1737 ntBASIC17.35■□□□□ 0.37
H3F3AP84243 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3AP84243 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3AP84243 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3AP84243 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
H3F3AP84243 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3AP84243 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 AL353807.1-201ENST00000427475 662 ntBASIC17.35■□□□□ 0.37
H3F3AP84243 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3AP84243 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3AP84243 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3AP84243 HLA-A-209ENST00000638375 975 ntBASIC17.35■□□□□ 0.37
H3F3AP84243 HTR7P1-201ENST00000538670 1336 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms