Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.09■□□□□ 0.33
NKX6-1P78426 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NKX6-1P78426 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.08■□□□□ 0.33
NKX6-1P78426 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-1P78426 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
NKX6-1P78426 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-1P78426 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NKX6-1P78426 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-1P78426 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NKX6-1P78426 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NKX6-1P78426 AL162377.1-201ENST00000618844 1793 ntBASIC17.08■□□□□ 0.33
NKX6-1P78426 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NKX6-1P78426 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.08■□□□□ 0.32
NKX6-1P78426 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NKX6-1P78426 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX6-1P78426 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NKX6-1P78426 FAM197Y1-201ENST00000421178 764 ntBASIC17.08■□□□□ 0.32
NKX6-1P78426 KRT16P5-201ENST00000455284 522 ntBASIC17.08■□□□□ 0.32
NKX6-1P78426 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX6-1P78426 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.08■□□□□ 0.32
NKX6-1P78426 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NKX6-1P78426 AC145285.6-201ENST00000604632 637 ntBASIC17.08■□□□□ 0.32
NKX6-1P78426 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX6-1P78426 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.08■□□□□ 0.32
NKX6-1P78426 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
NKX6-1P78426 AL512408.1-201ENST00000569378 2000 ntBASIC17.08■□□□□ 0.32
NKX6-1P78426 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NKX6-1P78426 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NKX6-1P78426 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-1P78426 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX6-1P78426 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NKX6-1P78426 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-1P78426 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.07■□□□□ 0.32
NKX6-1P78426 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.07■□□□□ 0.32
NKX6-1P78426 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-1P78426 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX6-1P78426 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX6-1P78426 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NKX6-1P78426 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NKX6-1P78426 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX6-1P78426 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX6-1P78426 AL157384.1-201ENST00000445995 2473 ntBASIC17.06■□□□□ 0.32
NKX6-1P78426 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX6-1P78426 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX6-1P78426 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NKX6-1P78426 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.06■□□□□ 0.32
NKX6-1P78426 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.06■□□□□ 0.32
NKX6-1P78426 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.06■□□□□ 0.32
NKX6-1P78426 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.06■□□□□ 0.32
NKX6-1P78426 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 AC116351.2-201ENST00000606540 1585 ntBASIC17.06■□□□□ 0.32
NKX6-1P78426 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX6-1P78426 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX6-1P78426 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NKX6-1P78426 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
NKX6-1P78426 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX6-1P78426 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX6-1P78426 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX6-1P78426 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.05■□□□□ 0.32
NKX6-1P78426 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
NKX6-1P78426 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 AC005521.1-201ENST00000393351 872 ntBASIC17.05■□□□□ 0.32
NKX6-1P78426 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms