Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBE2NP61088 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.09■□□□□ 0.33
UBE2NP61088 AC012618.2-201ENST00000428058 849 ntBASIC17.09■□□□□ 0.33
UBE2NP61088 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2NP61088 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.09■□□□□ 0.33
UBE2NP61088 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2NP61088 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
UBE2NP61088 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.09■□□□□ 0.33
UBE2NP61088 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2NP61088 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2NP61088 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2NP61088 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2NP61088 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2NP61088 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2NP61088 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2NP61088 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
UBE2NP61088 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.08■□□□□ 0.33
UBE2NP61088 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.08■□□□□ 0.33
UBE2NP61088 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2NP61088 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBE2NP61088 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 RPS2P55-201ENST00000397318 883 ntBASIC17.08■□□□□ 0.32
UBE2NP61088 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 AC107956.1-201ENST00000494359 873 ntBASIC17.08■□□□□ 0.32
UBE2NP61088 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.08■□□□□ 0.32
UBE2NP61088 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
UBE2NP61088 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
UBE2NP61088 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.08■□□□□ 0.32
UBE2NP61088 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.08■□□□□ 0.32
UBE2NP61088 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2NP61088 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.08■□□□□ 0.32
UBE2NP61088 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2NP61088 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2NP61088 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
UBE2NP61088 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2NP61088 KRT8P8-201ENST00000434750 1448 ntBASIC17.07■□□□□ 0.32
UBE2NP61088 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.07■□□□□ 0.32
UBE2NP61088 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.07■□□□□ 0.32
UBE2NP61088 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.07■□□□□ 0.32
UBE2NP61088 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2NP61088 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.07■□□□□ 0.32
UBE2NP61088 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
UBE2NP61088 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2NP61088 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 C1QL1P1-201ENST00000568105 661 ntBASIC17.07■□□□□ 0.32
UBE2NP61088 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2NP61088 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
UBE2NP61088 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.07■□□□□ 0.32
UBE2NP61088 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.07■□□□□ 0.32
UBE2NP61088 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
UBE2NP61088 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2NP61088 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBE2NP61088 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2NP61088 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2NP61088 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBE2NP61088 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.06■□□□□ 0.32
UBE2NP61088 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.06■□□□□ 0.32
UBE2NP61088 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.06■□□□□ 0.32
UBE2NP61088 AF186192.3-201ENST00000583427 947 ntBASIC17.06■□□□□ 0.32
UBE2NP61088 AC233702.5-201ENST00000584107 538 ntBASIC17.06■□□□□ 0.32
UBE2NP61088 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2NP61088 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms