Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RAP2CP1-201ENST00000605103 478 ntBASIC18.09■□□□□ 0.49
CDH12P55289 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CDH12P55289 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CDH12P55289 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDH12P55289 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH12P55289 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH12P55289 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.08■□□□□ 0.49
CDH12P55289 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH12P55289 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH12P55289 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH12P55289 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
CDH12P55289 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH12P55289 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH12P55289 MIR663A-201ENST00000385250 93 ntBASIC18.08■□□□□ 0.48
CDH12P55289 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDH12P55289 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH12P55289 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH12P55289 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH12P55289 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH12P55289 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH12P55289 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH12P55289 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH12P55289 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDH12P55289 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH12P55289 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CDH12P55289 BX276092.2-201ENST00000417668 665 ntBASIC18.07■□□□□ 0.48
CDH12P55289 CROCCP5-201ENST00000436658 830 ntBASIC18.07■□□□□ 0.48
CDH12P55289 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH12P55289 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH12P55289 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDH12P55289 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH12P55289 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDH12P55289 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH12P55289 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH12P55289 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH12P55289 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH12P55289 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH12P55289 GPX1P1-201ENST00000388829 606 ntBASIC18.06■□□□□ 0.48
CDH12P55289 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH12P55289 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH12P55289 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH12P55289 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH12P55289 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDH12P55289 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH12P55289 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CDH12P55289 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.05■□□□□ 0.48
CDH12P55289 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.05■□□□□ 0.48
CDH12P55289 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH12P55289 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.05■□□□□ 0.48
CDH12P55289 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms