Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN5P54829 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PTPN5P54829 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 AL162377.1-201ENST00000618844 1793 ntBASIC20.08■□□□□ 0.81
PTPN5P54829 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PTPN5P54829 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PTPN5P54829 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN5P54829 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN5P54829 AC004870.1-201ENST00000315132 882 ntBASIC20.08■□□□□ 0.81
PTPN5P54829 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.08■□□□□ 0.81
PTPN5P54829 AC023632.3-201ENST00000521633 145 ntBASIC20.08■□□□□ 0.81
PTPN5P54829 SLC25A1P4-201ENST00000567977 778 ntBASIC20.08■□□□□ 0.81
PTPN5P54829 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PTPN5P54829 AL031432.5-201ENST00000641059 760 ntBASIC20.08■□□□□ 0.81
PTPN5P54829 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN5P54829 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN5P54829 KRT8P10-201ENST00000450021 1447 ntBASIC20.08■□□□□ 0.8
PTPN5P54829 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN5P54829 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN5P54829 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN5P54829 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN5P54829 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN5P54829 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN5P54829 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN5P54829 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN5P54829 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN5P54829 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 DPP3P2-201ENST00000416030 1696 ntBASIC20.07■□□□□ 0.8
PTPN5P54829 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN5P54829 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PTPN5P54829 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPN5P54829 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.06■□□□□ 0.8
PTPN5P54829 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN5P54829 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.06■□□□□ 0.8
PTPN5P54829 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTPN5P54829 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 KRT17P6-201ENST00000453795 1220 ntBASIC20.06■□□□□ 0.8
PTPN5P54829 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTPN5P54829 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN5P54829 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTPN5P54829 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN5P54829 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN5P54829 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTPN5P54829 AC130371.2-201ENST00000619443 611 ntBASIC20.06■□□□□ 0.8
PTPN5P54829 AC011558.1-201ENST00000623459 338 ntBASIC20.06■□□□□ 0.8
PTPN5P54829 AC116562.4-202ENST00000641738 218 ntBASIC20.06■□□□□ 0.8
PTPN5P54829 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTPN5P54829 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN5P54829 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN5P54829 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN5P54829 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN5P54829 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN5P54829 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN5P54829 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN5P54829 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN5P54829 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPN5P54829 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN5P54829 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN5P54829 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN5P54829 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN5P54829 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN5P54829 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PTPN5P54829 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN5P54829 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN5P54829 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN5P54829 B3GAT3P1-201ENST00000471720 806 ntBASIC20.04■□□□□ 0.8
PTPN5P54829 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN5P54829 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms