Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP1B3P54709 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP1B3P54709 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1B3P54709 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.83■□□□□ 0.29
ATP1B3P54709 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1B3P54709 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP1B3P54709 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATP1B3P54709 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP1B3P54709 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1B3P54709 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.83■□□□□ 0.28
ATP1B3P54709 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP1B3P54709 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATP1B3P54709 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 AL050303.2-201ENST00000619798 666 ntBASIC16.83■□□□□ 0.28
ATP1B3P54709 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1B3P54709 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP1B3P54709 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP1B3P54709 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP1B3P54709 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.83■□□□□ 0.28
ATP1B3P54709 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1B3P54709 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
ATP1B3P54709 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP1B3P54709 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATP1B3P54709 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1B3P54709 AC018553.1-201ENST00000616682 1458 ntBASIC16.82■□□□□ 0.28
ATP1B3P54709 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ATP1B3P54709 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP1B3P54709 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP1B3P54709 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP1B3P54709 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP1B3P54709 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP1B3P54709 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP1B3P54709 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ATP1B3P54709 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP1B3P54709 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATP1B3P54709 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP1B3P54709 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP1B3P54709 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 AL121832.2-201ENST00000610979 668 ntBASIC16.81■□□□□ 0.28
ATP1B3P54709 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP1B3P54709 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 Z82202.1-201ENST00000623446 1880 ntBASIC16.81■□□□□ 0.28
ATP1B3P54709 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP1B3P54709 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
ATP1B3P54709 AC116351.2-201ENST00000606540 1585 ntBASIC16.81■□□□□ 0.28
ATP1B3P54709 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP1B3P54709 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP1B3P54709 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP1B3P54709 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms