Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.25■□□□□ 0.35
ASCL1P50553 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ASCL1P50553 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.25■□□□□ 0.35
ASCL1P50553 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.25■□□□□ 0.35
ASCL1P50553 KRT18P57-201ENST00000443599 1254 ntBASIC17.25■□□□□ 0.35
ASCL1P50553 SLC25A3P1-201ENST00000443844 931 ntBASIC17.25■□□□□ 0.35
ASCL1P50553 B3GAT3P1-201ENST00000471720 806 ntBASIC17.25■□□□□ 0.35
ASCL1P50553 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 KRT18P35-201ENST00000510488 1269 ntBASIC17.25■□□□□ 0.35
ASCL1P50553 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.25■□□□□ 0.35
ASCL1P50553 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.25■□□□□ 0.35
ASCL1P50553 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.25■□□□□ 0.35
ASCL1P50553 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.25■□□□□ 0.35
ASCL1P50553 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ASCL1P50553 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ASCL1P50553 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ASCL1P50553 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASCL1P50553 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ASCL1P50553 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.24■□□□□ 0.35
ASCL1P50553 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.24■□□□□ 0.35
ASCL1P50553 TERF1P1-201ENST00000311003 1181 ntBASIC17.24■□□□□ 0.35
ASCL1P50553 ARMC10P1-201ENST00000313754 855 ntBASIC17.24■□□□□ 0.35
ASCL1P50553 MESTP1-201ENST00000404287 994 ntBASIC17.24■□□□□ 0.35
ASCL1P50553 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.24■□□□□ 0.35
ASCL1P50553 AC004980.1-204ENST00000429707 299 ntBASIC17.24■□□□□ 0.35
ASCL1P50553 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.24■□□□□ 0.35
ASCL1P50553 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ASCL1P50553 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ASCL1P50553 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.24■□□□□ 0.35
ASCL1P50553 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASCL1P50553 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.24■□□□□ 0.35
ASCL1P50553 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ASCL1P50553 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.23■□□□□ 0.35
ASCL1P50553 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ASCL1P50553 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ASCL1P50553 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ASCL1P50553 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.23■□□□□ 0.35
ASCL1P50553 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.23■□□□□ 0.35
ASCL1P50553 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.23■□□□□ 0.35
ASCL1P50553 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASCL1P50553 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ASCL1P50553 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.23■□□□□ 0.35
ASCL1P50553 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.22■□□□□ 0.35
ASCL1P50553 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.22■□□□□ 0.35
ASCL1P50553 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ASCL1P50553 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.22■□□□□ 0.35
ASCL1P50553 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.22■□□□□ 0.35
ASCL1P50553 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.22■□□□□ 0.35
ASCL1P50553 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ASCL1P50553 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASCL1P50553 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms