Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PIK3CBP42338 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PIK3CBP42338 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
PIK3CBP42338 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.65■□□□□ 0.58
PIK3CBP42338 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
PIK3CBP42338 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PIK3CBP42338 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PIK3CBP42338 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PIK3CBP42338 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
PIK3CBP42338 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.65■□□□□ 0.58
PIK3CBP42338 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 TUBB8P6-201ENST00000436895 1288 ntBASIC18.65■□□□□ 0.58
PIK3CBP42338 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.65■□□□□ 0.58
PIK3CBP42338 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.65■□□□□ 0.58
PIK3CBP42338 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.65■□□□□ 0.58
PIK3CBP42338 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.65■□□□□ 0.58
PIK3CBP42338 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 AC069544.1-201ENST00000609399 999 ntBASIC18.65■□□□□ 0.58
PIK3CBP42338 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
PIK3CBP42338 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PIK3CBP42338 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PIK3CBP42338 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.64■□□□□ 0.58
PIK3CBP42338 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PIK3CBP42338 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PIK3CBP42338 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PIK3CBP42338 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.64■□□□□ 0.58
PIK3CBP42338 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CBP42338 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CBP42338 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CBP42338 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PIK3CBP42338 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.64■□□□□ 0.57
PIK3CBP42338 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.64■□□□□ 0.57
PIK3CBP42338 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.64■□□□□ 0.57
PIK3CBP42338 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CBP42338 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 MTDHP1-201ENST00000605323 784 ntBASIC18.64■□□□□ 0.57
PIK3CBP42338 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PIK3CBP42338 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PIK3CBP42338 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CBP42338 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.57
PIK3CBP42338 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.64■□□□□ 0.57
PIK3CBP42338 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PIK3CBP42338 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 ZNF815P-204ENST00000434898 1737 ntBASIC18.63■□□□□ 0.57
PIK3CBP42338 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CBP42338 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 ESRRAP1-201ENST00000400596 1257 ntBASIC18.63■□□□□ 0.57
PIK3CBP42338 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.63■□□□□ 0.57
PIK3CBP42338 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.63■□□□□ 0.57
PIK3CBP42338 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
PIK3CBP42338 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.63■□□□□ 0.57
PIK3CBP42338 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PIK3CBP42338 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PIK3CBP42338 BX323043.1-201ENST00000641006 1765 ntBASIC18.63■□□□□ 0.57
PIK3CBP42338 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CBP42338 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CBP42338 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
PIK3CBP42338 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CBP42338 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.62■□□□□ 0.57
PIK3CBP42338 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
PIK3CBP42338 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.62■□□□□ 0.57
PIK3CBP42338 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PIK3CBP42338 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.62■□□□□ 0.57
PIK3CBP42338 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CBP42338 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PIK3CBP42338 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.62■□□□□ 0.57
PIK3CBP42338 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CBP42338 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.62■□□□□ 0.57
PIK3CBP42338 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms