Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SOX6P35712 AC142381.2-201ENST00000566120 298 ntBASIC17.41■□□□□ 0.38
SOX6P35712 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SOX6P35712 AC005837.3-201ENST00000612163 286 ntBASIC17.41■□□□□ 0.38
SOX6P35712 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SOX6P35712 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX6P35712 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX6P35712 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SOX6P35712 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX6P35712 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SOX6P35712 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX6P35712 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 AL161938.1-201ENST00000569833 2180 ntBASIC17.4■□□□□ 0.38
SOX6P35712 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.4■□□□□ 0.38
SOX6P35712 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SOX6P35712 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.4■□□□□ 0.38
SOX6P35712 AC126544.1-201ENST00000580842 1059 ntBASIC17.4■□□□□ 0.38
SOX6P35712 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.4■□□□□ 0.38
SOX6P35712 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.4■□□□□ 0.38
SOX6P35712 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SOX6P35712 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SOX6P35712 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX6P35712 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SOX6P35712 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.4■□□□□ 0.38
SOX6P35712 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SOX6P35712 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.39■□□□□ 0.38
SOX6P35712 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SOX6P35712 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SOX6P35712 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SOX6P35712 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SOX6P35712 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SOX6P35712 AC068880.1-201ENST00000507289 2297 ntBASIC17.39■□□□□ 0.37
SOX6P35712 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SOX6P35712 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.39■□□□□ 0.37
SOX6P35712 AP001330.3-201ENST00000520123 633 ntBASIC17.39■□□□□ 0.37
SOX6P35712 AF213884.3-201ENST00000563833 479 ntBASIC17.39■□□□□ 0.37
SOX6P35712 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.39■□□□□ 0.37
SOX6P35712 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SOX6P35712 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SOX6P35712 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SOX6P35712 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SOX6P35712 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SOX6P35712 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
SOX6P35712 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SOX6P35712 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.38■□□□□ 0.37
SOX6P35712 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.38■□□□□ 0.37
SOX6P35712 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.38■□□□□ 0.37
SOX6P35712 MIR939-201ENST00000401314 82 ntBASIC17.38■□□□□ 0.37
SOX6P35712 AC099791.1-201ENST00000416440 715 ntBASIC17.38■□□□□ 0.37
SOX6P35712 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.38■□□□□ 0.37
SOX6P35712 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.38■□□□□ 0.37
SOX6P35712 AC091305.1-201ENST00000479476 895 ntBASIC17.38■□□□□ 0.37
SOX6P35712 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SOX6P35712 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 RASA4CP-201ENST00000424092 1398 ntBASIC17.38■□□□□ 0.37
SOX6P35712 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.38■□□□□ 0.37
SOX6P35712 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.38■□□□□ 0.37
SOX6P35712 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.38■□□□□ 0.37
SOX6P35712 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SOX6P35712 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SOX6P35712 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SOX6P35712 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SOX6P35712 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX6P35712 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX6P35712 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX6P35712 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms