Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.33■■□□□ 1.81
USP6P35125 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6P35125 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
USP6P35125 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP6P35125 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC26.33■■□□□ 1.81
USP6P35125 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.33■■□□□ 1.81
USP6P35125 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP6P35125 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
USP6P35125 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP6P35125 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC26.32■■□□□ 1.8
USP6P35125 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.32■■□□□ 1.8
USP6P35125 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.32■■□□□ 1.8
USP6P35125 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC26.32■■□□□ 1.8
USP6P35125 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC26.32■■□□□ 1.8
USP6P35125 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
USP6P35125 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP6P35125 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
USP6P35125 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP6P35125 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP6P35125 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC26.32■■□□□ 1.8
USP6P35125 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP6P35125 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 PCED1CP-201ENST00000419887 785 ntBASIC26.31■■□□□ 1.8
USP6P35125 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.31■■□□□ 1.8
USP6P35125 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC26.31■■□□□ 1.8
USP6P35125 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
USP6P35125 AC083849.1-201ENST00000615227 514 ntBASIC26.31■■□□□ 1.8
USP6P35125 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
USP6P35125 AL031432.5-201ENST00000641059 760 ntBASIC26.31■■□□□ 1.8
USP6P35125 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
USP6P35125 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
USP6P35125 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.31■■□□□ 1.8
USP6P35125 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP6P35125 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC26.31■■□□□ 1.8
USP6P35125 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC26.31■■□□□ 1.8
USP6P35125 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC26.31■■□□□ 1.8
USP6P35125 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
USP6P35125 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.3■■□□□ 1.8
USP6P35125 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC26.3■■□□□ 1.8
USP6P35125 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC26.3■■□□□ 1.8
USP6P35125 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC26.3■■□□□ 1.8
USP6P35125 ANKRD18DP-204ENST00000455355 1975 ntBASIC26.3■■□□□ 1.8
USP6P35125 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.3■■□□□ 1.8
USP6P35125 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.3■■□□□ 1.8
USP6P35125 MIR4674-201ENST00000582457 87 ntBASIC26.3■■□□□ 1.8
USP6P35125 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.3■■□□□ 1.8
USP6P35125 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC26.3■■□□□ 1.8
USP6P35125 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP6P35125 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP6P35125 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
USP6P35125 AC005332.1-201ENST00000577698 1310 ntBASIC26.29■■□□□ 1.8
USP6P35125 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC26.29■■□□□ 1.8
USP6P35125 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.29■■□□□ 1.8
USP6P35125 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP6P35125 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP6P35125 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.29■■□□□ 1.8
USP6P35125 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.29■■□□□ 1.8
USP6P35125 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP6P35125 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP6P35125 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC26.28■■□□□ 1.8
USP6P35125 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
USP6P35125 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC26.28■■□□□ 1.8
USP6P35125 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC26.28■■□□□ 1.8
USP6P35125 AC116407.4-201ENST00000623319 1061 ntBASIC26.28■■□□□ 1.8
USP6P35125 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP6P35125 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
USP6P35125 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
USP6P35125 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP6P35125 IER3-202ENST00000376377 1350 ntBASIC26.28■■□□□ 1.8
USP6P35125 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms