Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.78■□□□□ 0.44
SHC1P29353 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.78■□□□□ 0.44
SHC1P29353 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.78■□□□□ 0.44
SHC1P29353 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.78■□□□□ 0.44
SHC1P29353 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.78■□□□□ 0.44
SHC1P29353 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.78■□□□□ 0.44
SHC1P29353 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SHC1P29353 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SHC1P29353 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SHC1P29353 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SHC1P29353 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SHC1P29353 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SHC1P29353 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC1P29353 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.77■□□□□ 0.44
SHC1P29353 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SHC1P29353 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.77■□□□□ 0.44
SHC1P29353 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 TMEM191A-211ENST00000637163 1067 ntBASIC17.77■□□□□ 0.44
SHC1P29353 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHC1P29353 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SHC1P29353 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHC1P29353 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.77■□□□□ 0.43
SHC1P29353 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.77■□□□□ 0.43
SHC1P29353 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SHC1P29353 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC1P29353 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC1P29353 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SHC1P29353 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.76■□□□□ 0.43
SHC1P29353 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC1P29353 C1QBPP2-201ENST00000528754 825 ntBASIC17.76■□□□□ 0.43
SHC1P29353 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.76■□□□□ 0.43
SHC1P29353 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.76■□□□□ 0.43
SHC1P29353 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SHC1P29353 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHC1P29353 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SHC1P29353 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHC1P29353 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SHC1P29353 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
SHC1P29353 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 KRASP1-201ENST00000407852 552 ntBASIC17.75■□□□□ 0.43
SHC1P29353 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms