Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
COL8A2P25067 MESTP1-201ENST00000404287 994 ntBASIC16.41■□□□□ 0.22
COL8A2P25067 AL390955.1-201ENST00000428694 934 ntBASIC16.41■□□□□ 0.22
COL8A2P25067 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.41■□□□□ 0.22
COL8A2P25067 MIR6786-201ENST00000616843 113 ntBASIC16.41■□□□□ 0.22
COL8A2P25067 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.41■□□□□ 0.22
COL8A2P25067 FSCN1P1-201ENST00000568912 1481 ntBASIC16.41■□□□□ 0.22
COL8A2P25067 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COL8A2P25067 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COL8A2P25067 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.4■□□□□ 0.22
COL8A2P25067 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.4■□□□□ 0.22
COL8A2P25067 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 AC007952.6-201ENST00000573168 2673 ntBASIC16.4■□□□□ 0.22
COL8A2P25067 AC003957.1-201ENST00000625108 2673 ntBASIC16.4■□□□□ 0.22
COL8A2P25067 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
COL8A2P25067 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 AC009237.14-201ENST00000609975 1594 ntBASIC16.4■□□□□ 0.22
COL8A2P25067 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.4■□□□□ 0.22
COL8A2P25067 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COL8A2P25067 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.4■□□□□ 0.22
COL8A2P25067 AC012306.2-201ENST00000609350 630 ntBASIC16.4■□□□□ 0.22
COL8A2P25067 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.4■□□□□ 0.22
COL8A2P25067 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COL8A2P25067 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.4■□□□□ 0.22
COL8A2P25067 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COL8A2P25067 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
COL8A2P25067 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
COL8A2P25067 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.39■□□□□ 0.22
COL8A2P25067 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL8A2P25067 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL8A2P25067 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
COL8A2P25067 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL8A2P25067 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL8A2P25067 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COL8A2P25067 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.39■□□□□ 0.21
COL8A2P25067 B3GAT3P1-201ENST00000471720 806 ntBASIC16.39■□□□□ 0.21
COL8A2P25067 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.39■□□□□ 0.21
COL8A2P25067 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.39■□□□□ 0.21
COL8A2P25067 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.39■□□□□ 0.21
COL8A2P25067 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.39■□□□□ 0.21
COL8A2P25067 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
COL8A2P25067 AC097493.4-201ENST00000641197 219 ntBASIC16.39■□□□□ 0.21
COL8A2P25067 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COL8A2P25067 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.39■□□□□ 0.21
COL8A2P25067 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.39■□□□□ 0.21
COL8A2P25067 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
COL8A2P25067 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.39■□□□□ 0.21
COL8A2P25067 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
COL8A2P25067 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COL8A2P25067 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.38■□□□□ 0.21
COL8A2P25067 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 KRT18P21-201ENST00000515767 1272 ntBASIC16.38■□□□□ 0.21
COL8A2P25067 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms