Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHMP24386 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CHMP24386 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CHMP24386 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHMP24386 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP24386 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP24386 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMP24386 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP24386 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP24386 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP24386 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.13■□□□□ 0.49
CHMP24386 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHMP24386 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.13■□□□□ 0.49
CHMP24386 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CHMP24386 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHMP24386 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP24386 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP24386 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP24386 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP24386 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMP24386 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHMP24386 HLA-G-202ENST00000376815 851 ntBASIC18.12■□□□□ 0.49
CHMP24386 HLA-G-203ENST00000376818 1127 ntBASIC18.12■□□□□ 0.49
CHMP24386 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHMP24386 POM121L13P-201ENST00000422362 380 ntBASIC18.12■□□□□ 0.49
CHMP24386 AC128676.1-201ENST00000454392 318 ntBASIC18.12■□□□□ 0.49
CHMP24386 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP24386 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP24386 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP24386 AC120498.8-201ENST00000614275 531 ntBASIC18.12■□□□□ 0.49
CHMP24386 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP24386 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHMP24386 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP24386 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP24386 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHMP24386 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 LETM1P2-201ENST00000597330 2178 ntBASIC18.11■□□□□ 0.49
CHMP24386 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHMP24386 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP24386 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP24386 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP24386 AC006557.6-201ENST00000623071 864 ntBASIC18.11■□□□□ 0.49
CHMP24386 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP24386 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 PTBP1P-201ENST00000554374 1601 ntBASIC18.11■□□□□ 0.49
CHMP24386 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP24386 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP24386 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms