Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN3P20807 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.67■□□□□ 0.58
CAPN3P20807 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN3P20807 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.67■□□□□ 0.58
CAPN3P20807 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN3P20807 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.67■□□□□ 0.58
CAPN3P20807 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN3P20807 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN3P20807 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN3P20807 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN3P20807 TEX21P-204ENST00000641479 1693 ntBASIC18.66■□□□□ 0.58
CAPN3P20807 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN3P20807 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN3P20807 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN3P20807 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN3P20807 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN3P20807 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 CYP2T1P-201ENST00000432607 1285 ntBASIC18.66■□□□□ 0.58
CAPN3P20807 RNA5SP413-201ENST00000516373 109 ntBASIC18.66■□□□□ 0.58
CAPN3P20807 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN3P20807 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN3P20807 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CAPN3P20807 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN3P20807 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CAPN3P20807 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CAPN3P20807 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN3P20807 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN3P20807 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CAPN3P20807 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN3P20807 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN3P20807 C2orf69P4-201ENST00000565394 541 ntBASIC18.65■□□□□ 0.58
CAPN3P20807 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN3P20807 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN3P20807 AC006333.2-201ENST00000607957 2099 ntBASIC18.65■□□□□ 0.58
CAPN3P20807 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CAPN3P20807 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN3P20807 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN3P20807 AC018553.1-201ENST00000616682 1458 ntBASIC18.65■□□□□ 0.58
CAPN3P20807 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN3P20807 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN3P20807 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.64■□□□□ 0.58
CAPN3P20807 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN3P20807 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN3P20807 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.64■□□□□ 0.58
CAPN3P20807 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms