Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PPP3CBP16298 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.41■□□□□ 0.38
PPP3CBP16298 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.41■□□□□ 0.38
PPP3CBP16298 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PPP3CBP16298 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PPP3CBP16298 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PPP3CBP16298 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PPP3CBP16298 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
PPP3CBP16298 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.41■□□□□ 0.38
PPP3CBP16298 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PPP3CBP16298 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PPP3CBP16298 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.4■□□□□ 0.38
PPP3CBP16298 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 AC073912.3-201ENST00000624414 853 ntBASIC17.4■□□□□ 0.38
PPP3CBP16298 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PPP3CBP16298 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.4■□□□□ 0.38
PPP3CBP16298 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PPP3CBP16298 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPP3CBP16298 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PPP3CBP16298 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PPP3CBP16298 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP3CBP16298 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP3CBP16298 TNXA-203ENST00000507684 2038 ntBASIC17.39■□□□□ 0.37
PPP3CBP16298 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.39■□□□□ 0.37
PPP3CBP16298 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.39■□□□□ 0.37
PPP3CBP16298 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.39■□□□□ 0.37
PPP3CBP16298 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP3CBP16298 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.39■□□□□ 0.37
PPP3CBP16298 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP3CBP16298 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PPP3CBP16298 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
PPP3CBP16298 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PPP3CBP16298 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
PPP3CBP16298 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PPP3CBP16298 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.39■□□□□ 0.37
PPP3CBP16298 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PPP3CBP16298 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP3CBP16298 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PPP3CBP16298 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.38■□□□□ 0.37
PPP3CBP16298 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP3CBP16298 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PPP3CBP16298 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PPP3CBP16298 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms