Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.46■□□□□ 0.71
THRAP10827 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.46■□□□□ 0.71
THRAP10827 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
THRAP10827 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.46■□□□□ 0.71
THRAP10827 AL390719.1-204ENST00000412397 1219 ntBASIC19.46■□□□□ 0.71
THRAP10827 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.46■□□□□ 0.71
THRAP10827 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.46■□□□□ 0.71
THRAP10827 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
THRAP10827 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THRAP10827 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
THRAP10827 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.45■□□□□ 0.7
THRAP10827 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.45■□□□□ 0.7
THRAP10827 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.45■□□□□ 0.7
THRAP10827 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.45■□□□□ 0.7
THRAP10827 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.45■□□□□ 0.7
THRAP10827 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
THRAP10827 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THRAP10827 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
THRAP10827 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
THRAP10827 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.44■□□□□ 0.7
THRAP10827 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.44■□□□□ 0.7
THRAP10827 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.44■□□□□ 0.7
THRAP10827 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.44■□□□□ 0.7
THRAP10827 Z99916.2-201ENST00000604037 246 ntBASIC19.44■□□□□ 0.7
THRAP10827 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.44■□□□□ 0.7
THRAP10827 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.44■□□□□ 0.7
THRAP10827 TREX1-205ENST00000625293 1783 ntBASIC19.44■□□□□ 0.7
THRAP10827 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
THRAP10827 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THRAP10827 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.43■□□□□ 0.7
THRAP10827 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
THRAP10827 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
THRAP10827 AC239809.2-201ENST00000415381 517 ntBASIC19.43■□□□□ 0.7
THRAP10827 AC133681.1-201ENST00000465482 601 ntBASIC19.43■□□□□ 0.7
THRAP10827 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.43■□□□□ 0.7
THRAP10827 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.43■□□□□ 0.7
THRAP10827 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
THRAP10827 MIR4497-201ENST00000583208 89 ntBASIC19.43■□□□□ 0.7
THRAP10827 AC124016.1-201ENST00000609552 612 ntBASIC19.43■□□□□ 0.7
THRAP10827 AL023875.1-201ENST00000640777 796 ntBASIC19.43■□□□□ 0.7
THRAP10827 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.43■□□□□ 0.7
THRAP10827 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.43■□□□□ 0.7
THRAP10827 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THRAP10827 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms