Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.39■□□□□ 0.85
RARAP10276 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RARAP10276 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
RARAP10276 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RARAP10276 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.38■□□□□ 0.85
RARAP10276 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RARAP10276 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.38■□□□□ 0.85
RARAP10276 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RARAP10276 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 UNC93B4-201ENST00000505679 747 ntBASIC20.38■□□□□ 0.85
RARAP10276 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.38■□□□□ 0.85
RARAP10276 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.38■□□□□ 0.85
RARAP10276 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.38■□□□□ 0.85
RARAP10276 AC026471.1-201ENST00000564629 3026 ntBASIC20.38■□□□□ 0.85
RARAP10276 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RARAP10276 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RARAP10276 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 LINC01465-201ENST00000408887 1940 ntBASIC20.37■□□□□ 0.85
RARAP10276 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RARAP10276 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.37■□□□□ 0.85
RARAP10276 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.37■□□□□ 0.85
RARAP10276 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RARAP10276 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.37■□□□□ 0.85
RARAP10276 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.37■□□□□ 0.85
RARAP10276 UNC93B5-201ENST00000530315 699 ntBASIC20.37■□□□□ 0.85
RARAP10276 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 AL121906.2-201ENST00000621597 723 ntBASIC20.37■□□□□ 0.85
RARAP10276 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.37■□□□□ 0.85
RARAP10276 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.37■□□□□ 0.85
RARAP10276 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RARAP10276 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.37■□□□□ 0.85
RARAP10276 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RARAP10276 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.36■□□□□ 0.85
RARAP10276 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.36■□□□□ 0.85
RARAP10276 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.36■□□□□ 0.85
RARAP10276 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.36■□□□□ 0.85
RARAP10276 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RARAP10276 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RARAP10276 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.35■□□□□ 0.85
RARAP10276 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.35■□□□□ 0.85
RARAP10276 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.35■□□□□ 0.85
RARAP10276 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
RARAP10276 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.35■□□□□ 0.85
RARAP10276 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.35■□□□□ 0.85
RARAP10276 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.35■□□□□ 0.85
RARAP10276 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RARAP10276 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms