Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RPSAP08865 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RPSAP08865 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RPSAP08865 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RPSAP08865 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.7■□□□□ 0.58
RPSAP08865 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.7■□□□□ 0.58
RPSAP08865 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.7■□□□□ 0.58
RPSAP08865 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 AL356740.2-201ENST00000601559 647 ntBASIC18.7■□□□□ 0.58
RPSAP08865 pRNA.6-201ENST00000610482 90 ntBASIC18.7■□□□□ 0.58
RPSAP08865 pRNA.5-201ENST00000612139 90 ntBASIC18.7■□□□□ 0.58
RPSAP08865 pRNA.11-201ENST00000618423 90 ntBASIC18.7■□□□□ 0.58
RPSAP08865 pRNA.13-201ENST00000619112 90 ntBASIC18.7■□□□□ 0.58
RPSAP08865 AC018695.7-201ENST00000624587 2492 ntBASIC18.7■□□□□ 0.58
RPSAP08865 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RPSAP08865 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RPSAP08865 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
RPSAP08865 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.7■□□□□ 0.58
RPSAP08865 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.7■□□□□ 0.58
RPSAP08865 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPSAP08865 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RPSAP08865 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RPSAP08865 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RPSAP08865 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 AC010141.3-201ENST00000456659 717 ntBASIC18.69■□□□□ 0.58
RPSAP08865 AC009299.2-201ENST00000482477 511 ntBASIC18.69■□□□□ 0.58
RPSAP08865 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.69■□□□□ 0.58
RPSAP08865 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.69■□□□□ 0.58
RPSAP08865 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPSAP08865 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPSAP08865 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPSAP08865 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.68■□□□□ 0.58
RPSAP08865 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPSAP08865 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPSAP08865 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.68■□□□□ 0.58
RPSAP08865 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RPSAP08865 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RPSAP08865 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.67■□□□□ 0.58
RPSAP08865 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RPSAP08865 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RPSAP08865 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RPSAP08865 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RPSAP08865 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPSAP08865 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RPSAP08865 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.67■□□□□ 0.58
RPSAP08865 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.67■□□□□ 0.58
RPSAP08865 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 AP006587.3-201ENST00000525742 1516 ntBASIC18.67■□□□□ 0.58
RPSAP08865 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPSAP08865 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms