Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ERCC1P07992 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.2■□□□□ 0.34
ERCC1P07992 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.2■□□□□ 0.34
ERCC1P07992 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ERCC1P07992 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC1P07992 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC1P07992 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
ERCC1P07992 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC1P07992 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC1P07992 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC1P07992 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ERCC1P07992 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC1P07992 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 AC120498.9-201ENST00000339021 3867 ntBASIC17.19■□□□□ 0.34
ERCC1P07992 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
ERCC1P07992 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC1P07992 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC1P07992 POM121L13P-201ENST00000422362 380 ntBASIC17.19■□□□□ 0.34
ERCC1P07992 GCSHP5-201ENST00000443090 522 ntBASIC17.19■□□□□ 0.34
ERCC1P07992 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ERCC1P07992 AC093827.2-201ENST00000512654 315 ntBASIC17.19■□□□□ 0.34
ERCC1P07992 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC1P07992 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.19■□□□□ 0.34
ERCC1P07992 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC1P07992 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ERCC1P07992 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ERCC1P07992 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC1P07992 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC1P07992 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC1P07992 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC1P07992 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC1P07992 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ERCC1P07992 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC1P07992 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC1P07992 AC005829.2-201ENST00000571422 1056 ntBASIC17.18■□□□□ 0.34
ERCC1P07992 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.18■□□□□ 0.34
ERCC1P07992 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ERCC1P07992 KRT8P17-201ENST00000453110 1448 ntBASIC17.18■□□□□ 0.34
ERCC1P07992 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC1P07992 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
ERCC1P07992 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.18■□□□□ 0.34
ERCC1P07992 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC1P07992 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC1P07992 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.17■□□□□ 0.34
ERCC1P07992 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ERCC1P07992 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 UBE2SP1-201ENST00000450587 669 ntBASIC17.17■□□□□ 0.34
ERCC1P07992 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC1P07992 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ERCC1P07992 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC1P07992 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 AC093484.2-201ENST00000580996 2166 ntBASIC17.17■□□□□ 0.34
ERCC1P07992 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.17■□□□□ 0.34
ERCC1P07992 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.17■□□□□ 0.34
ERCC1P07992 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ERCC1P07992 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ERCC1P07992 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC1P07992 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC1P07992 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms